Package: sdmpredictors 0.2.15

Salvador Fernandez

sdmpredictors: Species Distribution Modelling Predictor Datasets

Terrestrial and marine predictors for species distribution modelling from multiple sources, including WorldClim <https://www.worldclim.org/>,, ENVIREM <https://envirem.github.io/>, Bio-ORACLE <https://bio-oracle.org/> and MARSPEC <http://www.marspec.org/>.

Authors:Samuel Bosch [aut], Lennert Tyberghein [ctb], Olivier De Clerck [ctb], Salvador Fernandez [aut, cre], Lennert Schepers [ctb], LifeWatch Belgium [fnd]

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sdmpredictors.pdf |sdmpredictors.html✨
sdmpredictors/json (API)
NEWS

# Install 'sdmpredictors' in R:

install.packages('sdmpredictors', repos = c('https://lifewatch.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://github.com/lifewatch/sdmpredictors/issues

On CRAN:

bio-oracle lifewatch lifewatchvliz species-distribution-modelling

7.44 score 30 stars 204 scripts 761 downloads 3 mentions 19 exports 8 dependencies

Last updated 1 years agofrom:dfbc772899. Checks:OK: 7. Indexed: yes.

Target	Result	Date
Doc / Vignettes	OK	Nov 09 2024
R-4.5-win	OK	Nov 09 2024
R-4.5-linux	OK	Nov 09 2024
R-4.4-win	OK	Nov 09 2024
R-4.4-mac	OK	Nov 09 2024
R-4.3-win	OK	Nov 09 2024
R-4.3-mac	OK	Nov 09 2024

Exports:calculate_statistics correlation_groups dataset_citations equalareaproj get_future_layers get_layers_info get_paleo_layers layer_citations layer_stats layers_correlation list_datasets list_layers list_layers_future list_layers_paleo load_layers lonlatproj pearson_correlation_matrix plot_correlation sdm_to_bo

Dependencies:lattice R.methodsS3 R.oo R.utils raster Rcpp sp terra

sdmpredictors quickstart guide

Samuel Bosch

Rendered fromquickstart.Rmdusingknitr::rmarkdownon Nov 09 2024.

Last update: 2021-07-15
Started: 2016-09-21

Citation

Development and contributors

Readme and manuals

Help Manual

Help page	Topics
Calculate statistics for a given raster.	calculate_statistics
Groups layers based on the Pearson correlation	correlation_groups
Generate dataset citations	dataset_citations
World Behrmann equal area coordinate reference system (ESRI:54017), used when using load_layers with equal_area = TRUE	equalareaproj
Get the name of future climate layer(s) based on the current climate layer(s)	get_future_layers
Layer info for specific layer codes	get_layers_info
Get the name of paleo climate layer(s) based on the current climate layer(s)	get_paleo_layers
Generate citations for all layers	layer_citations
Gives basic layer statistics	layer_stats
Gives the Pearson correlation between layers	layers_correlation
Lists the supported datasets	list_datasets
List the current climate layers provided by one or more datasets	list_layers
List the future climate layers provided by one or more datasets	list_layers_future
List the paleo climate layers provided by one or more datasets	list_layers_paleo
Load layers	load_layers
Longitude/latitude coordinate reference system (EPSG:4326), used when using load_layers with equal_area = FALSE	lonlatproj
Calculate the Pearson correlation coefficient matrix for a rasterstack	pearson_correlation_matrix
Plot the correlation matrix for the provided layercodes	plot_correlation
Translate file name from sdmpredictors to bio-oracle	sdm_to_bo
sdmpredictors: Species Distribution Modeling Predictor Datasets	sdmpredictors